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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6541221_6541617_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6541221 - 6541617

Intron Length:

397

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTGC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TCTCATTCAACT

Flanking Amino Acid:

LTAQWLPDVTRPEGKDFSIH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.2

38.5

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

89.3

0.88

0.6

84.5

23.3

Minor 5ss

38.8

-1.3

50.2

46.4

Minor BPS

55.5

0.25

1.7

74.74

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011390

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029035

6540542 - 6547540

6999

ENSAPLT00000011927

6541045 - 6547540

6496