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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6541764_6543055_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6541764 - 6543055

Intron Length:

1292

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TTATTTACAACT

Flanking Amino Acid:

DASHYDSEKGEFGGFGSVSG

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

73.9

36.8

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

29.6

-2.3

3.5

41.1

45.6

Minor BPS

54.9

0.23

1.8

77.75

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011390

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029035

6540542 - 6547540

6999

ENSAPLT00000011927

6541045 - 6547540

6496