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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6544275_6544430_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6544275 - 6544430

Intron Length:

156

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGGTTTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

TCTGTCTCAAGA

Flanking Amino Acid:

GHLLSASDDHTICLWDISAV

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

82.6

29.4

Major BPS

77.3

0.68

81.5

Major PPT

75.7

0.58

1.1

79.2

38.4

Minor 5ss

35.4

-1.7

2.9

48.5

40.3

Minor BPS

49.1

-0

1.9

62.43

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011390

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029035

6540542 - 6547540

6999

ENSAPLT00000011927

6541045 - 6547540

6496