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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6544592_6544713_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6544592 - 6544713

Intron Length:

122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TAAGCCTTTATT

Flanking Amino Acid:

GSVADDQKLMIWDTRSNNTS

Intron Amino Acid Position:

258

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

69.1

41.9

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

89.2

0.88

0.7

81.3

30.7

Minor 5ss

34.5

-1.8

3.3

44.8

43.4

Minor BPS

59.2

0.37

1.7

73.78

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011390

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029035

6540542 - 6547540

6999

ENSAPLT00000011927

6541045 - 6547540

6496