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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6546388_6546498_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6546388 - 6546498

Intron Length:

111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TCCCCTGTAATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTTAC

U12 Branch Point Sequence:

TCCCCTGTAATA

Flanking Amino Acid:

DAEDGPPELLFIHGGHTAKI

Intron Amino Acid Position:

372

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

79.6

35.4

Major BPS

62.6

0.31

1.2

55.1

41.7

Major PPT

65.1

0.34

0.9

33.8

Minor 5ss

34.9

-1.7

3.1

47.1

42.6

Minor BPS

48.9

-0

59.67

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011390

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029035

6540542 - 6547540

6999

ENSAPLT00000011927

6541045 - 6547540

6496