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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6549604_6550710_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6549604 - 6550710

Intron Length:

1107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTCAGTCTG

5'SS Class:

major

3'SS Sequence:

TCTACCCACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAC

U12 Branch Point Sequence:

ATATCCTAAATT

Flanking Amino Acid:

SSLHQELSIYKGCLEIYGHL

Intron Amino Acid Position:

564

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.6

0.46

1.3

66.4

45.1

Major BPS

73.5

0.58

0.9

75.4

28.3

Major PPT

68.3

0.41

0.9

61.7

33.8

Minor 5ss

-1.7

2.9

42.5

Minor BPS

70.3

0.72

1.6

83.26

37.9

Associated Gene:

Gene:

SYNC

Ensembl Gene ID:

ENSAPLG00000021934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038500

6549540 - 6554583

5044