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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6550836_6551839_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6550836 - 6551839

Intron Length:

1004

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGCGTC

5'SS Class:

major

3'SS Sequence:

TTTCGCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCATAAC

U12 Branch Point Sequence:

TCCCCCATAACC

Flanking Amino Acid:

KRDEEVGQYREQVEELEDRL

Intron Amino Acid Position:

506

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.1

63.6

42.5

Major BPS

0.08

1.1

55.6

Major PPT

75.4

0.57

0.8

66.3

35.8

Minor 5ss

39.1

-1.2

3.7

49.5

47.1

Minor BPS

61.4

0.34

1.7

69.03

42.3

Associated Gene:

Gene:

SYNC

Ensembl Gene ID:

ENSAPLG00000021934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019592

6550311 - 6554583

4273

ENSAPLT00000038500

6549540 - 6554583

5044