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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6559689_6575688_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6559689 - 6575688

Intron Length:

16000

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCTTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAG

U12 Branch Point Sequence:

TGTCCTCTGAGC

Flanking Amino Acid:

TESPQQQQGAGSAKAENDKR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

67.9

37.4

Major BPS

55.1

0.13

1.5

54.7

43.1

Major PPT

78.2

0.63

0.8

72.5

32.1

Minor 5ss

24.1

-3

3.3

42.8

Minor BPS

46.8

-0.2

1.9

60.78

38.5

Associated Gene:

Gene:

KIAA1522

Ensembl Gene ID:

ENSAPLG00000029185

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025968

6559454 - 6582201

22748