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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6566676_6575688_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6566676 - 6575688

Intron Length:

9013

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCTTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAG

U12 Branch Point Sequence:

TGTCCTCTGAGC

Flanking Amino Acid:

PWSRAGKQRAGSAKAENDKR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

69.2

36.8

Major BPS

55.1

0.13

1.5

54.7

43.1

Major PPT

78.2

0.63

0.8

72.5

32.1

Minor 5ss

30.3

-2.3

3.5

Minor BPS

46.8

-0.2

1.9

60.78

38.5

Associated Gene:

Gene:

KIAA1522

Ensembl Gene ID:

ENSAPLG00000029185

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039349

6566588 - 6581034

14447