Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_6574266_6575688_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6574266 - 6575688

Intron Length:

1423

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCTTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAG

U12 Branch Point Sequence:

TGTCCTCTGAGC

Flanking Amino Acid:

LSSLLAFFKKGSAKAENDKR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

68.5

38.7

Major BPS

55.1

0.13

1.5

54.7

43.1

Major PPT

78.2

0.63

0.8

72.5

32.1

Minor 5ss

26.2

-2.7

2.9

22.7

37.4

Minor BPS

46.8

-0.2

1.9

60.78

38.5

Associated Gene:

Gene:

KIAA1522

Ensembl Gene ID:

ENSAPLG00000029185

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023538

6574211 - 6581034

6824