Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_6576141_6577241_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6576141 - 6577241

Intron Length:

1101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCCACACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCCAC

U12 Branch Point Sequence:

TCTGCCCACACA

Flanking Amino Acid:

WDHGDTNSLQSCASSEDDSV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

48.9

-0

1.3

58.1

40.4

Major PPT

68.2

0.41

0.9

61.6

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

43.2

-0.5

2.4

59.22

46.6

Associated Gene:

Gene:

KIAA1522

Ensembl Gene ID:

ENSAPLG00000029185

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025968

6559454 - 6582201

22748

ENSAPLT00000023538

6574211 - 6581034

6824

ENSAPLT00000039349

6566588 - 6581034

14447