Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_6583763_6584056_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6583763 - 6584056

Intron Length:

294

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGGAGG

5'SS Class:

major

3'SS Sequence:

CTTTGCACCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

GCTTTCCCAACT

Flanking Amino Acid:

NAAYPSPSKAKPAEKGTKNS

Intron Amino Acid Position:

348

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.1

58.4

46.1

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

72.2

0.5

0.9

62.9

38.3

Minor 5ss

33.9

-1.8

3.2

45.3

43.6

Minor BPS

0.17

1.9

73.49

43.1

Associated Gene:

Gene:

YARS1

Ensembl Gene ID:

ENSAPLG00000005739

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005972

6582861 - 6586771

3911