Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_6584193_6584578_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6584193 - 6584578

Intron Length:

386

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TGTCGCGACGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTGCAG

U12 Branch Point Sequence:

TCTGTCGCGACG

Flanking Amino Acid:

EALEKDFAEQVVHPGDLKNS

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.7

80.2

27.1

Major BPS

45.5

-0.2

1.7

60.7

45.9

Major PPT

61.2

0.25

54.3

40.5

Minor 5ss

27.5

-2.6

32.5

42.3

Minor BPS

41.7

-0.8

2.3

49.54

Associated Gene:

Gene:

YARS1

Ensembl Gene ID:

ENSAPLG00000005739

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005972

6582861 - 6586771

3911