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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6584950_6585148_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6584950 - 6585148

Intron Length:

199

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTGGTCCC

5'SS Class:

major

3'SS Sequence:

TCTCTTCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGAAAT

U12 Branch Point Sequence:

GGCTGCAGAAAT

Flanking Amino Acid:

TGSKMSSSEEDSKIDLLDRK

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.2

61.8

Major BPS

48.8

-0

1.2

54.6

37.8

Major PPT

85.1

0.79

0.7

77.2

31.5

Minor 5ss

30.5

-2.2

2.9

37.1

40.1

Minor BPS

41.5

-0.5

2.1

57.06

44.5

Associated Gene:

Gene:

YARS1

Ensembl Gene ID:

ENSAPLG00000005739

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005972

6582861 - 6586771

3911