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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6585659_6585847_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6585659 - 6585847

Intron Length:

189

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAA

U12 Branch Point Sequence:

CCAAGCTCAAGG

Flanking Amino Acid:

LSGLLYPGLQALDEEYLKVD

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

72.4

39.2

Major BPS

61.8

0.29

1.1

63.4

35.6

Major PPT

0.58

0.8

30.9

Minor 5ss

27.9

-2.5

3.3

40.6

45.6

Minor BPS

38.7

-0.9

2.1

36.65

45.1

Associated Gene:

Gene:

YARS1

Ensembl Gene ID:

ENSAPLG00000005739

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005972

6582861 - 6586771

3911