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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6603266_6606286_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6603266 - 6606286

Intron Length:

3021

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCTGTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTAAT

U12 Branch Point Sequence:

TGATCACTAATG

Flanking Amino Acid:

IIVVVLFMWAGVIALFCRQY

Intron Amino Acid Position:

151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.2

77.7

33.5

Major BPS

74.4

0.61

0.9

73.6

28.6

Major PPT

80.6

0.69

0.9

Minor 5ss

35.9

-1.6

2.6

42.5

44.2

Minor BPS

49.3

-0.1

59.5

41.8

Associated Gene:

Gene:

FNDC5

Ensembl Gene ID:

ENSAPLG00000006265

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006495

6602315 - 6608494

6180