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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6606380_6607944_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6606380 - 6607944

Intron Length:

1565

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TCCCCTTGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

GTTTCACCATCT

Flanking Amino Acid:

EAEKLASKNKDEVTMKEMAK

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.9

1.15

0.7

89.3

28.6

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

76.2

0.59

0.9

71.7

32.7

Minor 5ss

-2.8

4.1

39.6

46.4

Minor BPS

44.7

-0.3

2.3

71.66

44.3

Associated Gene:

Gene:

FNDC5

Ensembl Gene ID:

ENSAPLG00000006265

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006495

6602315 - 6608494

6180