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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6625500_6625626_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6625500 - 6625626

Intron Length:

127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTC|GTAAGCAGC

5'SS Class:

major

3'SS Sequence:

TCCCCTCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCCCAT

U12 Branch Point Sequence:

TCTCCCTCGTCT

Flanking Amino Acid:

LSRYFAPAALKWAVLALSAS

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.4

0.34

1.3

59.8

45.2

Major BPS

46.8

-0.2

1.4

54.3

42.9

Major PPT

74.2

0.55

0.7

68.7

Minor 5ss

41.3

-1

2.8

52.8

38.7

Minor BPS

42.5

-0.5

3.5

73.07

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028668

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018145

6624618 - 6626509

1892