Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_6628835_6629623_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6628835 - 6629623

Intron Length:

789

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGAGGAA

U12 Branch Point Sequence:

TTTTTTTTCCCT

Flanking Amino Acid:

VLSGGKGKYSRLEVQADVQK

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

69.5

41.5

Major BPS

44.2

-0.3

1.4

37.5

42.1

Major PPT

90.6

0.91

0.6

85.8

21.3

Minor 5ss

31.4

-2.1

3.2

40.6

45.6

Minor BPS

45.4

-0.2

3.6

82.56

39.6

Associated Gene:

Gene:

RNF19B

Ensembl Gene ID:

ENSAPLG00000006334

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006576

6627431 - 6638559

11129