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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6662224_6663951_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
6662224 - 6663951

Intron Length:
1728

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTGGGTAAT

5'SS Class:
major

3'SS Sequence:
CTCCGTTCCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTGTAT

U12 Branch Point Sequence:
GTGTGCCCATCT

Flanking Amino Acid:
LKETMDSGKLVSDEMVVELI

Intron Amino Acid Position:
83

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.8
0.63
1
75.8
35.2

Major BPS
58.9
0.22
1.5
59.6
46.8

Major PPT
73.8
0.54
0.8
68.1
32

Minor 5ss
30.7
-2.2
3
38.1
41.3

Minor BPS
40.9
-0.6
2.3
61.78
47.4

Associated Gene:

Gene:
AK2

Ensembl Gene ID:

Chromosome:
24

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

6657692 - 6664761
7070