Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_6668589_6668702_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6668589 - 6668702

Intron Length:

114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCTGCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCAAGAT

U12 Branch Point Sequence:

GACCCCTCAAGA

Flanking Amino Acid:

GKVARSHPQARMLLGIAADS

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

54.8

0.12

1.2

51.3

42.7

Major PPT

77.3

0.61

0.9

37.3

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

-0.1

1.9

55.37

42.9

Associated Gene:

Gene:

AZIN2

Ensembl Gene ID:

ENSAPLG00000006932

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007201

6666428 - 6670842

4415