Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_6669702_6670151_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6669702 - 6670151

Intron Length:

450

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGATC

5'SS Class:

strong_major

3'SS Sequence:

TTTGCCCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAT

U12 Branch Point Sequence:

TTTGCCCCCACA

Flanking Amino Acid:

SPCPKPLLHKKPCPDHLLCS

Intron Amino Acid Position:

341

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.8

82.1

Major BPS

0.5

1.1

71.2

35.2

Major PPT

76.2

0.59

0.8

69.5

31.3

Minor 5ss

31.4

-2.1

3.2

42.1

Minor BPS

46.4

-0.2

2.3

68.3

43.9

Associated Gene:

Gene:

AZIN2

Ensembl Gene ID:

ENSAPLG00000006932

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007201

6666428 - 6670842

4415