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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6716518_6717421_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6716518 - 6717421

Intron Length:

904

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCGTGCTCGTTAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCCCAT

U12 Branch Point Sequence:

ACCCTCCCATCG

Flanking Amino Acid:

LLEVLSGVKLQIEPPAQRSL

Intron Amino Acid Position:

398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

34.9

Major BPS

59.9

0.25

1.3

70.1

Major PPT

59.3

0.21

58.1

38.5

Minor 5ss

34.1

-1.8

3.1

41.9

38.9

Minor BPS

-1.1

1.9

35.58

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017630

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023899

6712681 - 6718247

5567