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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6724179_6726732_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6724179 - 6726732

Intron Length:

2554

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGCAGGAG

5'SS Class:

weak_major

3'SS Sequence:

GTGGCTCTGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAAGCAT

U12 Branch Point Sequence:

AAGCATGCAGCG

Flanking Amino Acid:

SSGYGSDPAKIPSPSPPAPG

Intron Amino Acid Position:

278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.9

0.12

1.1

47.2

37.1

Major BPS

47.3

-0.1

1.4

55.4

40.3

Major PPT

63.3

0.3

1.1

43.1

Minor 5ss

23.1

-3.1

3.5

38.6

Minor BPS

31.3

-1.5

29.72

34.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021254

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040915

6723272 - 6740226

16955