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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6790501_6790633_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6790501 - 6790633

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAATG

5'SS Class:

strong_major

3'SS Sequence:

GGGTGCCGTGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

ATCGCCCTGACA

Flanking Amino Acid:

NTRWNTLNKKVAQRIAQLQE

Intron Amino Acid Position:

1112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

0.8

80.6

33.8

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

0.2

1.1

50.7

43.9

Minor 5ss

31.6

-2.1

39.4

46.1

Minor BPS

53.3

0.1

1.8

65.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018624

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026251

6783145 - 6791014

7870