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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6821097_6822035_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6821097 - 6822035

Intron Length:

939

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCAAAC

U12 Branch Point Sequence:

CAAACCTCAGCT

Flanking Amino Acid:

EFLVKNDPCRARGRTNLELR

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

52.2

0.06

1.1

Major PPT

0.81

0.7

77.5

31.2

Minor 5ss

35.3

-1.7

3.4

50.1

46.5

Minor BPS

48.3

-0

1.9

63.68

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029448

6817293 - 6825086

7794