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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6822248_6822785_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6822248 - 6822785

Intron Length:

538

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCCATTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTCCATTTCACA

Flanking Amino Acid:

SPATPASGAKTPHHFSRCYD

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

79.5

36.8

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

80.6

0.69

0.8

75.3

32.8

Minor 5ss

41.3

-1

3.7

63.6

48.1

Minor BPS

49.4

-0

1.9

65.36

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029448

6817293 - 6825086

7794