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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6834415_6834980_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6834415 - 6834980

Intron Length:

566

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTGAC

U12 Branch Point Sequence:

GAGCACTGACGC

Flanking Amino Acid:

PHPNKLPGIFDDVHAADSRQ

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

70.5

33.4

Major BPS

61.3

0.28

52.7

34.2

Major PPT

82.8

0.74

0.7

77.1

24.9

Minor 5ss

30.9

-2.2

3.3

36.6

41.5

Minor BPS

37.5

-0.9

1.9

39.92

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009638

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010034

6833445 - 6836904

3460