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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6839963_6840512_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6839963 - 6840512

Intron Length:

550

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TCGGCTGTCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

TCACCCTGCACC

Flanking Amino Acid:

MRIKEGSSRPVWSDDEWLKK

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

65.8

42.7

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

0.38

59.9

40.5

Minor 5ss

33.7

-1.9

2.8

31.9

42.5

Minor BPS

49.4

-0

1.9

61.78

43.1

Associated Gene:

Gene:

PPIE

Ensembl Gene ID:

ENSAPLG00000009716

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010111

6838420 - 6842149

3730