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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6840966_6841463_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6840966 - 6841463

Intron Length:

498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAC

U12 Branch Point Sequence:

GTGTCTGTAACG

Flanking Amino Acid:

FAFVEFELAEDAAAAIDNMN

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.8

71.2

34.5

Major BPS

62.2

0.3

1.2

38.7

Major PPT

78.6

0.64

0.8

73.3

31.7

Minor 5ss

24.3

-3

3.1

29.7

43.1

Minor BPS

55.3

0.03

2.1

63.58

44.6

Associated Gene:

Gene:

PPIE

Ensembl Gene ID:

ENSAPLG00000009716

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010111

6838420 - 6842149

3730