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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6843855_6843951_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6843855 - 6843951

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

CTTAACTGAACT

Flanking Amino Acid:

APPQEQKQMLGERLFPLIQA

Intron Amino Acid Position:

561

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

77.6

32.8

Major BPS

82.2

0.8

71.9

35.8

Major PPT

86.1

0.81

0.7

80.2

31.9

Minor 5ss

31.6

-2.1

3.1

31.7

42.6

Minor BPS

60.6

0.41

1.7

79.07

42.4

Associated Gene:

Gene:

PABPC4

Ensembl Gene ID:

ENSAPLG00000009729

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036593

6843555 - 6855304

11750

ENSAPLT00000022952

6843555 - 6855304

11750

ENSAPLT00000010160

6843555 - 6855304

11750