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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6845476_6845648_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6845476 - 6845648

Intron Length:

173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCATG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCCATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

ATTTCTTCCATT

Flanking Amino Acid:

PRWQQGGRPQGFQGMPNAMR

Intron Amino Acid Position:

447

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

77.8

38.7

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

78.5

0.64

0.8

79.3

27.9

Minor 5ss

37.5

-1.4

47.8

47.9

Minor BPS

55.1

0.24

1.9

78.23

38.7

Associated Gene:

Gene:

PABPC4

Ensembl Gene ID:

ENSAPLG00000009729

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022952

6843555 - 6855304

11750

ENSAPLT00000010160

6843555 - 6855304

11750