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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6846856_6848132_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6846856 - 6848132

Intron Length:

1277

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGACCA

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

ATTACTATAGGT

Flanking Amino Acid:

SFEKHEDANKGVNLYIKNLD

Intron Amino Acid Position:

249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

38.3

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

79.9

0.67

0.8

72.5

37.7

Minor 5ss

38.3

-1.3

48.9

46.8

Minor BPS

45.6

-0.2

2.1

68.07

42.7

Associated Gene:

Gene:

PABPC4

Ensembl Gene ID:

ENSAPLG00000009729

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022952

6843555 - 6855304

11750