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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6849244_6849538_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6849244 - 6849538

Intron Length:

295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGATGT

5'SS Class:

strong_major

3'SS Sequence:

TCCGCACGTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAG

U12 Branch Point Sequence:

TGCTCAGAGATC

Flanking Amino Acid:

SAFGNILSCKVVCDENGSKG

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.6

33.4

Major BPS

58.6

0.21

1.5

57.1

41.8

Major PPT

0.23

50.8

38.3

Minor 5ss

34.2

-1.8

3.2

47.6

47.9

Minor BPS

39.4

-0.8

2.3

50.89

40.7

Associated Gene:

Gene:

PABPC4

Ensembl Gene ID:

ENSAPLG00000009729

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036593

6843555 - 6855304

11750

ENSAPLT00000022952

6843555 - 6855304

11750

ENSAPLT00000010160

6843555 - 6855304

11750