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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6862148_6862539_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6862148 - 6862539

Intron Length:

392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCCCAACTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATGAA

U12 Branch Point Sequence:

TTTTTCCCAACT

Flanking Amino Acid:

RLVPTAFEKQGSSKLEKAEI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.5

35.4

Major BPS

58.9

0.22

49.8

35.1

Major PPT

68.5

0.42

0.9

60.8

33.8

Minor 5ss

27.4

-2.6

3.2

35.6

41.2

Minor BPS

65.1

0.55

1.9

88.92

35.4

Associated Gene:

Gene:

HEYL

Ensembl Gene ID:

ENSAPLG00000028745

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022402

6859920 - 6866004

6085