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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6862633_6937725_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6862633 - 6937725

Intron Length:

75093

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTCCCAAA

5'SS Class:

weak_major

3'SS Sequence:

TGTGTGCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCAAAC

U12 Branch Point Sequence:

GCTGCTGGAAGA

Flanking Amino Acid:

AAPLLDDLREVVDRAGMERL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.5

0.13

1.4

57.3

43.3

Major BPS

52.2

0.06

1.1

Major PPT

73.8

0.54

66.3

40.8

Minor 5ss

39.5

-1.2

2.9

49.5

46.4

Minor BPS

39.4

-0.8

2.2

47.92

42.9

Associated Gene:

Gene:

CAP1

Ensembl Gene ID:

ENSAPLG00000011906

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012411

6862480 - 6943966

81487