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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6880268_6880542_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6880268 - 6880542

Intron Length:

275

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCGCTG

5'SS Class:

major

3'SS Sequence:

CTTGCTCCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGTGAC

U12 Branch Point Sequence:

TGGTCTCGGAGT

Flanking Amino Acid:

KAHENKPLAQGPLKGFLEAL

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.35

1.3

55.2

Major BPS

48.3

-0.1

1.3

40.8

41.4

Major PPT

70.1

0.45

65.8

Minor 5ss

38.5

-1.3

3.6

55.3

48.9

Minor BPS

43.2

-0.4

61.03

42.9

Associated Gene:

Gene:

NT5C1A

Ensembl Gene ID:

ENSAPLG00000010540

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010963

6879902 - 6882801

2900