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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6880728_6881174_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6880728 - 6881174

Intron Length:

447

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TTCGTGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

CACCTCTCACCG

Flanking Amino Acid:

AEKVSGAIEEGIAAATIFSP

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

68.8

43.8

Major BPS

72.7

0.56

30.1

Major PPT

73.7

0.53

0.9

65.1

41.2

Minor 5ss

31.9

-2.1

2.9

41.8

Minor BPS

42.8

-0.6

1.8

41.43

43.2

Associated Gene:

Gene:

NT5C1A

Ensembl Gene ID:

ENSAPLG00000010540

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010963

6879902 - 6882801

2900