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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6908368_6909761_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6908368 - 6909761

Intron Length:

1394

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTGAGTGCT

5'SS Class:

major

3'SS Sequence:

TGTCTCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGCCAC

U12 Branch Point Sequence:

CTGGCAGCCACC

Flanking Amino Acid:

NKWVRNRFLRRPGPNVPPVY

Intron Amino Acid Position:

406

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.3

74.9

35.3

Major BPS

42.9

-0.4

1.2

45.5

37.5

Major PPT

80.4

0.68

0.8

31.1

Minor 5ss

31.3

-2.1

3.2

40.8

38.7

Minor BPS

33.3

-1.3

2.5

42.88

44.5

Associated Gene:

Gene:

TRIT1

Ensembl Gene ID:

ENSAPLG00000011421

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011928

6904902 - 6917088

12187