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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6937838_6938014_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6937838 - 6938014

Intron Length:

177

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGCAC

5'SS Class:

major

3'SS Sequence:

TCCCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTGAT

U12 Branch Point Sequence:

ACATGGTGATGC

Flanking Amino Acid:

PGMCGDGSPQGVAQYVQAFD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

63.9

42.4

Major BPS

66.1

0.4

1.3

57.1

49.4

Major PPT

74.6

0.55

0.7

24.8

Minor 5ss

30.6

-2.2

3.3

33.6

41.9

Minor BPS

31.7

-1.4

2.4

37.78

40.3

Associated Gene:

Gene:

CAP1

Ensembl Gene ID:

ENSAPLG00000011906

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035977

6937726 - 6944919

7194

ENSAPLT00000012411

6862480 - 6943966

81487