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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6938116_6938627_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6938116 - 6938627

Intron Length:

512

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGGAAT

5'SS Class:

major

3'SS Sequence:

TCTTTGTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCACAT

U12 Branch Point Sequence:

AGCTCTGTCACA

Flanking Amino Acid:

KEVGGDVQKHAEMVHAGLMS

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.3

78.6

37.2

Major BPS

59.9

0.25

1.2

38.9

Major PPT

85.3

0.79

0.8

83.9

31.1

Minor 5ss

35.3

-1.7

3.3

47.8

41.5

Minor BPS

45.2

-0.3

2.3

57.67

42.3

Associated Gene:

Gene:

CAP1

Ensembl Gene ID:

ENSAPLG00000011906

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035977

6937726 - 6944919

7194

ENSAPLT00000012411

6862480 - 6943966

81487