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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6940532_6941064_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6940532 - 6941064

Intron Length:

533

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTTCT

5'SS Class:

major

3'SS Sequence:

CCTTGCATCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

TCTCCTTGCATC

Flanking Amino Acid:

TNRILKEYKDVDKKQVDWVK

Intron Amino Acid Position:

225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.1

74.4

36.7

Major BPS

72.4

0.56

73.5

32.5

Major PPT

67.2

0.39

0.9

58.4

37.1

Minor 5ss

44.8

-0.6

2.8

60.6

43.7

Minor BPS

47.5

-0.2

1.9

60.09

39.7

Associated Gene:

Gene:

CAP1

Ensembl Gene ID:

ENSAPLG00000011906

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035977

6937726 - 6944919

7194

ENSAPLT00000012411

6862480 - 6943966

81487