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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6941171_6941276_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6941171 - 6941276

Intron Length:

106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTGCT

5'SS Class:

major

3'SS Sequence:

TGGCCTCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTGCAA

U12 Branch Point Sequence:

GCTTGTGCAACG

Flanking Amino Acid:

HTTGLTWSKTGPVATEGAKA

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

72.9

36.6

Major BPS

50.7

0.02

1.5

63.4

44.3

Major PPT

76.9

0.61

0.9

73.3

37.1

Minor 5ss

37.5

-1.4

3.3

56.3

41.9

Minor BPS

40.3

-0.8

2.4

47.55

45.9

Associated Gene:

Gene:

CAP1

Ensembl Gene ID:

ENSAPLG00000011906

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035977

6937726 - 6944919

7194

ENSAPLT00000012411

6862480 - 6943966

81487