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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6942639_6942740_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6942639 - 6942740

Intron Length:

102

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

CTTGTCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAG

U12 Branch Point Sequence:

TTTTTGTGAGCT

Flanking Amino Acid:

IKGKINSITLDNCKKLGLVF

Intron Amino Acid Position:

424

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

70.7

41.3

Major BPS

57.3

0.18

1.7

57.1

49.4

Major PPT

0.81

0.8

80.4

31.5

Minor 5ss

38.9

-1.2

2.8

45.8

44.3

Minor BPS

49.7

0.06

2.3

80.41

41.5

Associated Gene:

Gene:

CAP1

Ensembl Gene ID:

ENSAPLG00000011906

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035977

6937726 - 6944919

7194

ENSAPLT00000012411

6862480 - 6943966

81487