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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6943518_6943882_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6943518 - 6943882

Intron Length:

365

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

TTTCACCCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TCTGTTTTCACC

Flanking Amino Acid:

VLIPTEGGDFTEFPVPEQFK

Intron Amino Acid Position:

500

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

32.8

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

0.68

0.8

70.6

35.9

Minor 5ss

41.2

-1

3.4

64.1

41.5

Minor BPS

52.1

0.05

1.8

64.58

42.1

Associated Gene:

Gene:

CAP1

Ensembl Gene ID:

ENSAPLG00000011906

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035977

6937726 - 6944919

7194

ENSAPLT00000012411

6862480 - 6943966

81487