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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6945474_6945973_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6945474 - 6945973

Intron Length:

500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTGAGCCTG

5'SS Class:

major

3'SS Sequence:

GAAATCAATAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

GCTTCTTTTATG

Flanking Amino Acid:

WFCATILPFLQTLLLTT*

Intron Amino Acid Position:

298

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.2

0.34

1.1

53.8

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

48.2

-0.1

1.2

42.7

Minor 5ss

38.2

-1.3

3.2

53.2

44.6

Minor BPS

56.5

0.06

1.7

59.47

42.8

Associated Gene:

Gene:

PPT1

Ensembl Gene ID:

ENSAPLG00000012514

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035158

6945452 - 6950892

5441

ENSAPLT00000031115

6945452 - 6950459

5008