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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6946093_6946522_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6946093 - 6946522

Intron Length:

430

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTTCT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAG

U12 Branch Point Sequence:

TCTCAGCCAACT

Flanking Amino Acid:

PLRETPLYTEDRLGLQEMDK

Intron Amino Acid Position:

295

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

81.4

33.4

Major BPS

58.6

0.22

1.5

38.9

Major PPT

89.9

0.9

0.6

88.1

21.8

Minor 5ss

41.4

-1

3.1

45.7

Minor BPS

-0.6

2.5

63.7

45.8

Associated Gene:

Gene:

PPT1

Ensembl Gene ID:

ENSAPLG00000012514

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035158

6945452 - 6950892

5441

ENSAPLT00000031115

6945452 - 6950459

5008

ENSAPLT00000013025

6945457 - 6949830

4374