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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6946595_6946771_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6946595 - 6946771

Intron Length:

177

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCTGGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTGAC

U12 Branch Point Sequence:

CCTTTGGTGACT

Flanking Amino Acid:

DTMVDPPISEWFGFYKSGQA

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

65.6

41.7

Major BPS

56.2

0.15

1.3

48.8

46.3

Major PPT

80.2

0.68

0.9

77.3

31.4

Minor 5ss

24.7

-2.9

28.6

43.8

Minor BPS

43.9

-0.4

2.6

65.53

45.9

Associated Gene:

Gene:

PPT1

Ensembl Gene ID:

ENSAPLG00000012514

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031115

6945452 - 6950459

5008

ENSAPLT00000013025

6945457 - 6949830

4374

ENSAPLT00000035158

6945452 - 6950892

5441