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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6948444_6948714_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6948444 - 6948714

Intron Length:

271

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGCTGA

5'SS Class:

major

3'SS Sequence:

CCTTTCTCCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

GCGGCGCTGACT

Flanking Amino Acid:

AIGFSQGGQFLRAVAQRCPS

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.5

0.41

1.2

59.2

42.3

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

81.2

0.7

76.4

25.6

Minor 5ss

46.1

-0.4

2.9

65.4

45.8

Minor BPS

41.5

-0.5

2.3

56.11

46.4

Associated Gene:

Gene:

PPT1

Ensembl Gene ID:

ENSAPLG00000012514

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031115

6945452 - 6950459

5008

ENSAPLT00000013025

6945457 - 6949830

4374