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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6949599_6949730_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6949599 - 6949730

Intron Length:

132

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGGGTGGG

5'SS Class:

major

3'SS Sequence:

CGTTCCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCGTGAC

U12 Branch Point Sequence:

CGGGCCGTGACA

Flanking Amino Acid:

APPVVLWHGMGDSCCNPRSM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.1

45.2

Major BPS

48.6

-0

1.2

40.4

Major PPT

80.1

0.68

0.8

73.3

31.6

Minor 5ss

24.8

-2.9

3.1

21.9

37.8

Minor BPS

46.3

-0.3

2.2

54.38

44.7

Associated Gene:

Gene:

PPT1

Ensembl Gene ID:

ENSAPLG00000012514

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035158

6945452 - 6950892

5441

ENSAPLT00000031115

6945452 - 6950459

5008

ENSAPLT00000013025

6945457 - 6949830

4374